Analysis of expressed sequence tags from Gibberella zeae (anamorph Fusarium graminearum).
Trail F, Xu JR, San Miguel P, Halgren RG, Kistler HC.
Fungal Genetics and Biology 2003 Mar;38(2):187-97.  [more]

In silico identification of components of the Toll-like receptor (TLR) signaling pathway in clustered chicken expressed sequence tags (ESTs).
Lynn DJ, Lloyd AT, O'Farrelly C.
Veterinary Immunology and Immunopathology. 2003 Jun 20;93(3-4):177-84.  [more]

Retinitis Pigmentosa
Nature Genetics: Mutations in a novel retina-specific gene cause autosomal dominant retinitis pigmentosa
The first gene characterised as being a cause for retinal degradation in retinitis pigmentosa, RP1, was characterised using the STACKdb and stackPACK system. Specific expression in the eye was determined using STACKdb, and the stackPACK toolset was used to produce a predicted protein sequence from a series of assembled ESTs.
July 1999    [read the paper]

Ovarian Cancer Gene
Genome Research: Alternative gene form discovery and candidate gene selection from gene indexing projects.
Alternate forms of expression were shown to exist for the CAM KINASE ovarian gene in cancerous tissue libraries.
March 1999  [read the paper]

Assessment of the Parallelisation approach of d2-cluster for High-Performance Sequence Clustering.
Carpenter JE, Christoffels A, Weinbach Y, Hide WA. Journal of Computational Chemistry. 2002 23(7):755-757.  [more]

Profiling the malaria genome: a gene survey of three species of malaria parasite with comparison to other apicomplexan species.
Carlton JM, Muller R, Yowell CA, Fluegge MR, Sturrock KA, Pritt JR, Vargas-Serrato E, Galinski MR, Barnwell JW, Mulder N, Kanapin A, Cawley SE, Hide WA, Dame JB.
Mol Biochem Parasitol 2001 118(2):201-210    [more]